Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_335Hypothetical protein. (188 aa)    
Predicted Functional Partners:
VC82_333
Trehalose synthase.
       0.526
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
       0.526
VC82_2888
Helix-turn-helix domain protein; Pfam:pfam01381 Helix-turn-helix.
  
     0.514
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
       0.510
VC82_336
Peptide methionine sulfoxide reductase; Pfam:pfam01641 SelR domain.
       0.501
VC82_337
Methionine-R-sulfoxide reductase; Pfam:pfam01641 SelR domain; Belongs to the MsrB Met sulfoxide reductase family.
       0.480
VC82_338
Pfam:pfam07609 Protein of unknown function (DUF1572).
       0.476
VC82_603
Arsenate reductase; Pfam:pfam03960 ArsC family; Belongs to the ArsC family.
  
     0.404
VC82_572
Hypothetical protein; Pfam:pfam10025 Uncharacterized conserved protein (DUF2267).
  
     0.400
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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