Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_362VWA domain protein; Pfam:pfam01882 Protein of unknown function DUF58. (444 aa)    
Predicted Functional Partners:
VC82_357
Pfam:pfam01944 Integral membrane protein DUF95.
 
  
 0.954
VC82_360
Hypothetical protein; Pfam:pfam14258 Domain of unknown function (DUF4350).
 
    0.951
VC82_359
Hypothetical protein.
 
     0.950
VC82_358
Putative membrane spanning protein.
 
     0.942
VC82_356
RDD domain containing protein; Pfam:pfam06271 RDD family.
 
    0.907
VC82_361
Pfam:pfam07726 ATPase family associated with various cellular activities (AAA).
 
  
 0.901
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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