STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC82_374Cysteine desulfurase; Pfam:pfam00266 Aminotransferase class-V. (382 aa)    
Predicted Functional Partners:
VC82_2812
Sulfurtransferase; Pfam:pfam00899 ThiF family.
   
 0.983
VC82_1388
Ferredoxin; Pfam:pfam00970 Oxidoreductase FAD-binding domain.
  
 0.847
VC82_1058
Ferredoxin.
 
 0.823
VC82_1452
Iron-sulfur binding protein; Pfam:pfam01521 Iron-sulphur cluster biosynthesis; Belongs to the HesB/IscA family.
 
  
 0.806
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
  
 0.757
VC82_1848
Transcriptional regulator, BadM/Rrf2 family; Pfam:pfam02082 Transcriptional regulator.
  
  
 0.696
VC82_2051
Pfam:pfam02082 Transcriptional regulator.
  
  
 0.696
VC82_1966
Pfam:pfam08712 Scaffold protein Nfu/NifU N terminal.
 
 
 0.630
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.619
VC82_2492
Acyl carrier protein.
    
 
 0.619
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.