Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_387Hypothetical protein; Pfam:pfam13387 Domain of unknown function (DUF4105). (406 aa)    
Predicted Functional Partners:
VC82_726
Anti-sigma factor; Pfam:pfam04773 FecR protein.
  
     0.671
VC82_386
Phosphatidylserine synthase; Pfam:pfam01066 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.589
VC82_727
TonB-dependent receptor plug; Pfam:pfam13715 Domain of unknown function (DUF4480).
  
     0.452
VC82_389
Pfam:pfam01923 Cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
     
 0.450
icmF
Methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
  
 0.434
VC82_385
NikM domain containing protein; Pfam:pfam10670 Domain of unknown function (DUF4198).
       0.419
VC82_516
(2Fe-2S)-binding protein.
  
    0.415
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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