STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC82_408Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. (552 aa)    
Predicted Functional Partners:
VC82_409
Phosphoesterase PA-phosphatase-related protein; Pfam:pfam01569 PAP2 superfamily.
  
    0.799
VC82_410
Hypothetical protein.
       0.796
VC82_411
MATE efflux family protein; Pfam:pfam01554 MatE.
  
    0.791
VC82_407
Lysylphosphatidylglycerol synthetase; Pfam:pfam03706 Uncharacterized protein family (UPF0104).
 
    0.727
VC82_406
Pfam:pfam00535 Glycosyl transferase family 2.
 
    0.692
VC82_1077
Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.654
VC82_2779
Hypothetical protein; Pfam:pfam13646 HEAT repeats.
  
     0.591
VC82_2875
Conserved hypothetical lipoprotein.
  
     0.585
VC82_2930
Hypothetical protein.
  
     0.513
VC82_2210
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 0.494
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.