Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_416beta-N-acetylhexosaminidase; Pfam:pfam00728 Glycosyl hydrolase family 20, catalytic domain. (538 aa)    
Predicted Functional Partners:
VC82_239
Pfam:pfam00933 Glycosyl hydrolase family 3 N terminal domain.
 
  
 0.919
VC82_2481
Beta-N-acetylhexosaminidase; Pfam:pfam00933 Glycosyl hydrolase family 3 N terminal domain; Belongs to the glycosyl hydrolase 3 family.
    
 0.909
cutC
CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.666
VC82_413
Periplasmic beta-glucosidase; Pfam:pfam00933 Glycosyl hydrolase family 3 N terminal domain; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.625
VC82_240
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
  
  0.612
VC82_414
Endo-1,4-beta-xylanase; Pfam:pfam07859 alpha/beta hydrolase fold.
   
   0.600
VC82_415
G-D-S-L family lipolytic protein; Pfam:pfam13472 GDSL-like Lipase/Acylhydrolase family.
       0.591
VC82_1737
Histidine ammonia-lyase; Pfam:pfam00221 Aromatic amino acid lyase.
   
    0.576
nagB
Glucosamine-6-phosphate deaminase / PIG-L family deacetylase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
 
   
 0.491
VC82_2194
Alpha-N-acetylgalactosaminidase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.487
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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