VC82_421 protein (Muricauda lutaonensis) - STRING interaction network

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VC82_421

Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (132 aa)

Predicted Functional Partners:

def

0.820

VC82_2571

0.699

VC82_419

0.690

alaS

0.670

VC82_422

0.627

miaA

0.581

Your Current Organism:

Muricauda lutaonensis

NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VC82_2571	VC82_421	VC82_2571	VC82_421	Transcriptional regulator; Pfam:pfam02622 Uncharacterized ACR, COG1678; Belongs to the UPF0301 (AlgH) family.	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	0.699
VC82_419	VC82_421	VC82_419	VC82_421	Hypothetical protein.	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	0.690
VC82_419	VC82_422	VC82_419	VC82_422	Hypothetical protein.	Pfam:pfam14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal; Belongs to the transferase hexapeptide repeat family.	0.486
VC82_419	def	VC82_419	VC82_420	Hypothetical protein.	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.690
VC82_421	VC82_2571	VC82_421	VC82_2571	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	Transcriptional regulator; Pfam:pfam02622 Uncharacterized ACR, COG1678; Belongs to the UPF0301 (AlgH) family.	0.699
VC82_421	VC82_419	VC82_421	VC82_419	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	Hypothetical protein.	0.690
VC82_421	VC82_422	VC82_421	VC82_422	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	Pfam:pfam14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal; Belongs to the transferase hexapeptide repeat family.	0.627
VC82_421	alaS	VC82_421	VC82_896	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.	0.670
VC82_421	def	VC82_421	VC82_420	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.820
VC82_421	miaA	VC82_421	VC82_3024	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.	0.581
VC82_422	VC82_419	VC82_422	VC82_419	Pfam:pfam14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal; Belongs to the transferase hexapeptide repeat family.	Hypothetical protein.	0.486
VC82_422	VC82_421	VC82_422	VC82_421	Pfam:pfam14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal; Belongs to the transferase hexapeptide repeat family.	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	0.627
VC82_422	def	VC82_422	VC82_420	Pfam:pfam14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal; Belongs to the transferase hexapeptide repeat family.	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.594
alaS	VC82_421	VC82_896	VC82_421	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	0.670
def	VC82_419	VC82_420	VC82_419	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Hypothetical protein.	0.690
def	VC82_421	VC82_420	VC82_421	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	0.820
def	VC82_422	VC82_420	VC82_422	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Pfam:pfam14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal; Belongs to the transferase hexapeptide repeat family.	0.594
miaA	VC82_421	VC82_3024	VC82_421	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	0.581

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