Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_425Glycosyltransferase; Pfam:pfam14305 TupA-like ATPgrasp. (299 aa)    
Predicted Functional Partners:
VC82_424
Pfam:pfam00535 Glycosyl transferase family 2.
       0.582
VC82_2514
Putative udp-glucuronic acid epimerase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family.
 
    0.544
ctaA
Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.
  
    0.506
VC82_426
tRNA nucleotidyltransferase; Pfam:pfam01743 Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.500
VC82_1293
Conserved hypothetical periplasmic protein; Pfam:pfam12969 Domain of Unknown Function with PDB structure (DUF3857).
 
     0.431
VC82_626
Hypothetical protein.
  
    0.417
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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