Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_467Peroxidase; Pfam:pfam00578 AhpC/TSA family. (216 aa)    
Predicted Functional Partners:
VC82_466
Metal-dependent hydrolase; Pfam:pfam12867 DinB superfamily.
  
 
 0.578
hflX
GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
 
      0.541
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.537
VC82_115
Pfam:pfam00080 Copper/zinc superoxide dismutase (SODC).
   
 
 0.480
VC82_1059
ferredoxin--NADP reductase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.466
VC82_2059
ferredoxin-NADP reductase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.466
VC82_2115
Pfam:pfam13738 Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.466
VC82_1091
Thioredoxin; Pfam:pfam14595 Thioredoxin.
  
 0.430
VC82_1761
Hypothetical protein; Pfam:pfam13905 Thioredoxin-like.
  
 0.430
VC82_2235
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Pfam:pfam08534 Redoxin.
  
 0.430
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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