Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_526Transcriptional regulator; Pfam:pfam03965 Penicillinase repressor. (119 aa)    
Predicted Functional Partners:
VC82_527
Hypothetical protein; Pfam:pfam05569 BlaR1 peptidase M56.
 
 
 0.996
VC82_1741
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.967
VC82_1740
Transcriptional repressor, CopY family; Pfam:pfam03965 Penicillinase repressor.
  
  
 
0.905
VC82_1806
Heavy-metal transporting P-type ATPase; Pfam:pfam00122 E1-E2 ATPase.
  
  
 0.564
VC82_525
Na+/Ca+ antiporter, CaCA family; Pfam:pfam01699 Sodium/calcium exchanger protein.
       0.539
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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