STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC82_559Hypothetical protein. (130 aa)    
Predicted Functional Partners:
VC82_554
RNA polymerase subunit sigma-70.
  
     0.750
VC82_475
Hypothetical protein.
  
     0.730
VC82_547
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.675
VC82_2224
Membrane protein.
  
     0.609
VC82_626
Hypothetical protein.
  
     0.602
VC82_572
Hypothetical protein; Pfam:pfam10025 Uncharacterized conserved protein (DUF2267).
  
     0.600
VC82_168
Hypothetical protein; Pfam:pfam07366 SnoaL-like polyketide cyclase.
  
     0.591
VC82_603
Arsenate reductase; Pfam:pfam03960 ArsC family; Belongs to the ArsC family.
  
     0.579
VC82_2351
Hypothetical protein.
  
     0.569
ftsH-3
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.565
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.