Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC82_565Pfam:pfam00582 Universal stress protein family. (291 aa)    
Predicted Functional Partners:
VC82_566
Hypothetical protein.
       0.757
VC82_564
Pfam:pfam00582 Universal stress protein family.
 
    
0.654
VC82_605
Phosphatidylglycerophosphate synthase; Pfam:pfam01066 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.619
VC82_2431
Hypothetical protein; Pfam:pfam03432 Relaxase/Mobilisation nuclease domain.
  
     0.589
VC82_567
Hypothetical protein.
       0.520
VC82_626
Hypothetical protein.
  
    0.473
VC82_596
Nicotinic acid mononucleotide adenyltransferase.
  
     0.468
VC82_563
Pfam:pfam01515 Phosphate acetyl/butaryl transferase.
  
  
 0.459
VC82_559
Hypothetical protein.
 
     0.422
VC82_2351
Hypothetical protein.
  
     0.408
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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