Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_574KWG Leptospira repeat protein. (222 aa)    
Predicted Functional Partners:
VC82_575
3-oxoacyl-(Acyl-carrier-protein) reductase; Pfam:pfam00106 short chain dehydrogenase.
       0.773
VC82_576
Hypothetical protein; Pfam:pfam04205 FMN-binding domain.
       0.689
VC82_168
Hypothetical protein; Pfam:pfam07366 SnoaL-like polyketide cyclase.
  
     0.653
VC82_2263
Na-Ca exchanger/integrin-beta4; Pfam:pfam03160 Calx-beta domain.
  
    0.632
VC82_577
Hypothetical protein; Pfam:pfam00583 Acetyltransferase (GNAT) family.
  
    0.627
VC82_2958
Pfam:pfam00294 pfkB family carbohydrate kinase.
  
     0.624
VC82_626
Hypothetical protein.
  
     0.602
VC82_573
Hypothetical protein.
 
     0.571
VC82_1319
Hypothetical protein.
  
     0.526
VC82_2350
Hypothetical protein.
  
     0.521
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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