STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC82_587Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (254 aa)    
Predicted Functional Partners:
VC82_589
Putative oxidoreductase; Pfam:pfam00248 Aldo/keto reductase family.
 
  
 0.733
VC82_588
Hypothetical protein; Pfam:pfam12680 SnoaL-like domain.
  
    0.710
VC82_575
3-oxoacyl-(Acyl-carrier-protein) reductase; Pfam:pfam00106 short chain dehydrogenase.
  
   0.623
VC82_586
Hypothetical protein; Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
       0.580
VC82_793
Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
   0.544
VC82_1982
Short-chain dehydrogenase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
   0.502
VC82_2587
Oxidoreductase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
   0.447
VC82_270
Pfam:pfam00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
 
   0.402
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.