Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC82_590Cytochrome c family protein. (155 aa)    
Predicted Functional Partners:
VC82_1824
Pfam:pfam02433 Cytochrome C oxidase, mono-heme subunit/FixO; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.921
VC82_1924
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Pfam:pfam13247 4Fe-4S dicluster domain.
  
 
 0.863
VC82_516
(2Fe-2S)-binding protein.
  
   0.578
VC82_1947
Pfam:pfam00510 Cytochrome c oxidase subunit III.
   
   0.465
VC82_1948
Pfam:pfam00510 Cytochrome c oxidase subunit III.
   
   0.465
VC82_589
Putative oxidoreductase; Pfam:pfam00248 Aldo/keto reductase family.
       0.432
VC82_1929
Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
   0.407
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
Server load: low (18%) [HD]