Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
VC82_608Hypothetical protein. (318 aa)    
Predicted Functional Partners:
VC82_605
Phosphatidylglycerophosphate synthase; Pfam:pfam01066 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.762
VC82_606
Hypothetical protein; Pfam:pfam13671 AAA domain.
       0.762
VC82_607
Hypothetical protein.
       0.762
VC82_604
Hypothetical protein.
       0.756
VC82_602
Hypothetical protein.
       0.707
VC82_603
Arsenate reductase; Pfam:pfam03960 ArsC family; Belongs to the ArsC family.
       0.707
VC82_609
Opacity protein; Pfam:pfam13505 Outer membrane protein beta-barrel domain.
       0.460
VC82_610
Hypothetical protein.
       0.449
VC82_601
Phosphoribosyltransferase; Pfam:pfam00156 Phosphoribosyl transferase domain.
       0.416
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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