Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
VC82_625ABC transporter permease; Pfam:pfam02405 Permease; Belongs to the MlaE permease family. (268 aa)    
Predicted Functional Partners:
VC82_624
Organic solvent ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
 0.999
VC82_623
ABC transporter permease; Pfam:pfam02470 mce related protein.
 
 0.996
VC82_2477
ABC transporter substrate-binding protein; Pfam:pfam02470 mce related protein.
 
 0.940
VC82_814
ABC transporter permease; Pfam:pfam02405 Permease.
  
  
 
0.925
VC82_626
Hypothetical protein.
 
     0.626
VC82_622
Hypothetical protein; Pfam:pfam11964 SpoIIAA-like.
       0.618
VC82_384
Sulfate-transporting ATPase; Pfam:pfam00005 ABC transporter.
 
  
  0.480
VC82_2362
Pfam:pfam03739 Predicted permease YjgP/YjgQ family.
  
 
 0.472
VC82_627
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.419
VC82_2334
ABC transporter; Pfam:pfam02687 FtsX-like permease family.
  
    0.404
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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