Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dacAMembrane protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (270 aa)    
Predicted Functional Partners:
VC82_645
Pfam:pfam12412 Protein of unknown function (DUF3667).
       0.798
VC82_643
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.791
VC82_2879
Pfam:pfam02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I.
   
 
 0.731
VC82_80
Pfam:pfam02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I.
   
 
 0.731
VC82_3029
Pfam:pfam07949 YbbR-like protein.
 
  
 0.707
VC82_641
DoxX family protein; Pfam:pfam07681 DoxX.
       0.587
VC82_642
DUF1599 family protein; Pfam:pfam07659 Domain of Unknown Function (DUF1599).
       0.587
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.561
VC82_2445
Pfam:pfam07698 7TM receptor with intracellular HD hydrolase.
 
  
 0.509
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
 
     0.506
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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