Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
VC82_878Conserved hypothetical periplasmic protein. (147 aa)    
Predicted Functional Partners:
VC82_2064
Conserved hypothetical lipoprotein; Pfam:pfam10988 Protein of unknown function (DUF2807).
  
     0.667
VC82_1865
Hypothetical protein.
  
     0.642
VC82_2063
Deacylase.
  
     0.625
VC82_2733
Hypothetical protein.
  
     0.599
VC82_1882
Hypothetical protein.
  
     0.556
VC82_1412
Hypothetical protein.
  
     0.554
VC82_52
Hypothetical protein; Pfam:pfam14060 Domain of unknown function (DUF4252).
  
     0.544
VC82_1210
Nicotinic acid mononucleotide adenyltransferase.
  
     0.538
VC82_1753
Hypothetical protein; Pfam:pfam14362 Domain of unknown function (DUF4407).
  
     0.535
VC82_1949
Membrane protein; Pfam:pfam03626 Prokaryotic Cytochrome C oxidase subunit IV.
  
     0.524
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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