Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_92Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. (801 aa)    
Predicted Functional Partners:
VC82_2446
acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
VC82_93
acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
VC82_94
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
 0.996
VC82_841
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 0.983
VC82_1706
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
  
 0.981
VC82_2244
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
  
 0.981
VC82_1430
3-oxoacid CoA-transferase subunit A; Pfam:pfam01144 Coenzyme A transferase.
  
 
 0.953
VC82_1515
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
0.943
VC82_3019
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 
0.942
VC82_2777
Hypothetical protein.
  
 0.880
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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