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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC82_96Glycoside hydrolase, family GH15; Pfam:pfam00723 Glycosyl hydrolases family 15. (599 aa)    
Predicted Functional Partners:
VC82_97
Trehalose-phosphatase; Pfam:pfam00982 Glycosyltransferase family 20.
 
  
 0.992
VC82_333
Trehalose synthase.
 
  
 0.921
VC82_1037
Maltose phosphorylase; Pfam:pfam03632 Glycosyl hydrolase family 65 central catalytic domain.
     
 0.902
VC82_2822
Trehalase; Pfam:pfam01204 Trehalase.
     
  0.900
VC82_100
Pfam:pfam04389 Peptidase family M28.
       0.548
VC82_98
Hypothetical protein; Pfam:pfam12680 SnoaL-like domain.
       0.546
VC82_101
Aminopeptidase N; Pfam:pfam01433 Peptidase family M1.
       0.539
VC82_99
Pfam:pfam06736 Protein of unknown function (DUF1211).
       0.530
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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