Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_97Trehalose-phosphatase; Pfam:pfam00982 Glycosyltransferase family 20. (733 aa)    
Predicted Functional Partners:
VC82_96
Glycoside hydrolase, family GH15; Pfam:pfam00723 Glycosyl hydrolases family 15.
 
  
 0.992
VC82_2822
Trehalase; Pfam:pfam01204 Trehalase.
 
 0.980
VC82_333
Trehalose synthase.
    
 0.946
VC82_100
Pfam:pfam04389 Peptidase family M28.
    
  0.805
VC82_2514
Putative udp-glucuronic acid epimerase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family.
     
 0.800
VC82_98
Hypothetical protein; Pfam:pfam12680 SnoaL-like domain.
       0.800
VC82_115
Pfam:pfam00080 Copper/zinc superoxide dismutase (SODC).
   
  
 0.780
VC82_99
Pfam:pfam06736 Protein of unknown function (DUF1211).
       0.760
VC82_101
Aminopeptidase N; Pfam:pfam01433 Peptidase family M1.
  
    0.758
VC82_321
Peptidoglycan-binding protein; Pfam:pfam01476 LysM domain.
   
  
 0.741
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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