Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
VC82_99Pfam:pfam06736 Protein of unknown function (DUF1211). (207 aa)    
Predicted Functional Partners:
VC82_98
Hypothetical protein; Pfam:pfam12680 SnoaL-like domain.
 
     0.793
VC82_100
Pfam:pfam04389 Peptidase family M28.
       0.781
VC82_101
Aminopeptidase N; Pfam:pfam01433 Peptidase family M1.
       0.766
VC82_97
Trehalose-phosphatase; Pfam:pfam00982 Glycosyltransferase family 20.
       0.760
VC82_79
Hypothetical protein; Pfam:pfam13585 C-terminal domain of CHU protein family.
  
     0.723
VC82_2260
Transcriptional regulator, AraC family with parallel beta-helix repeat; Pfam:pfam13585 C-terminal domain of CHU protein family.
  
     0.696
VC82_885
Pfam:pfam14064 HmuY protein.
  
     0.671
VC82_884
Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
  
     0.636
VC82_2531
Addiction module antitoxin; Pfam:pfam03693 Uncharacterized protein family (UPF0156).
  
     0.634
VC82_2628
Hypothetical protein; Pfam:pfam13715 Domain of unknown function (DUF4480).
  
     0.631
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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