Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC82_997Dehydrogenase; Pfam:pfam00034 Cytochrome c. (1084 aa)    
Predicted Functional Partners:
VC82_996
Hypothetical protein; Pfam:pfam06283 Trehalose utilisation.
   
 0.992
VC82_1824
Pfam:pfam02433 Cytochrome C oxidase, mono-heme subunit/FixO; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.959
VC82_1924
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Pfam:pfam13247 4Fe-4S dicluster domain.
  
 
 0.911
VC82_516
(2Fe-2S)-binding protein.
 
 
 0.761
VC82_102
Putative glycosyl hydrolase (Putative secreted protein); Pfam:pfam06283 Trehalose utilisation.
 
  
 0.746
VC82_2562
Peptidylglycine monooxygenase.
 
 
 0.733
VC82_521
Oxidoreductase domain protein; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.664
VC82_309
Membrane protein.
 
  
 0.648
VC82_2564
Cytochrome C-containing protein; Pfam:pfam07587 Protein of unknown function (DUF1553).
  
     0.626
VC82_2563
Sulfatase; Pfam:pfam07394 Protein of unknown function (DUF1501).
 
     0.623
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.