STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ84203.1PqqC-like protein. (247 aa)    
Predicted Functional Partners:
SCZ85805.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.752
SCZ85767.1
General diffusion Gram-negative porins.
  
    0.732
SCZ86555.1
O-antigen polymerase.
  
     0.724
SCZ86669.1
Response regulator receiver protein.
  
     0.712
SCZ87003.1
Cytochrome c, class IC:Cytochrome c, class I.
  
   
 0.709
SCZ84343.1
Putative dolichol monophosphate mannose synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.678
SCZ86936.1
Amino acid permease-associated region.
  
     0.663
SCZ85736.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.602
SCZ85185.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.589
SCZ86998.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.589
Your Current Organism:
Nitrosomonas mobilis
NCBI taxonomy Id: 51642
Other names: N. mobilis, Nitrosococcus mobilis, Nitrosomonas sp. Ms1, strain Nc 2
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