STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ84212.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (279 aa)    
Predicted Functional Partners:
SCZ86036.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) (fragment).
 
0.999
gacS
Sensor protein GacS.
 0.997
SCZ84873.1
Sensory transduction histidine kinases.
 
 0.996
SCZ86954.1
Putative Diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 0.996
SCZ86033.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
  
 0.991
SCZ84849.1
Multi-sensor hybrid histidine kinase.
 
 0.987
SCZ86907.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
 
 0.986
SCZ84626.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S).
 
0.982
SCZ86713.1
Diguanylate cyclase (GGDEF domain).
 0.976
SCZ86044.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 0.970
Your Current Organism:
Nitrosomonas mobilis
NCBI taxonomy Id: 51642
Other names: N. mobilis, Nitrosococcus mobilis, Nitrosomonas sp. Ms1, strain Nc 2
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