STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ84911.1Glucose-methanol-choline (GMC) oxidoreductase. (645 aa)    
Predicted Functional Partners:
SCZ85744.1
TPR repeat.
    
 0.981
SCZ84910.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
  0.946
SCZ87003.1
Cytochrome c, class IC:Cytochrome c, class I.
   
 
 0.921
SCZ85807.1
Rieske iron-sulfur protein 2Fe-2S subunit.
 
  
 0.896
SCZ84676.1
Hypothetical protein; No homology to any previously reported sequences.
    
  0.861
SCZ85522.1
Sulphatase-modifying factor protein.
    
  0.861
SCZ86812.1
Hypothetical protein; No homology to any previously reported sequences.
    
  0.861
SCZ84767.1
Ankyrin.
    
 0.828
SCZ84770.1
Ankyrin-repeat.
    
 0.828
SCZ85986.1
Ankyrin-repeat.
    
 0.828
Your Current Organism:
Nitrosomonas mobilis
NCBI taxonomy Id: 51642
Other names: N. mobilis, Nitrosococcus mobilis, Nitrosomonas sp. Ms1, strain Nc 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.