Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCZ84339.1 | SCZ86933.1 | NSMM_150077 | NSMM_820028 | Phosphopantetheine attachment site. | Urea carboxylase. | 0.859 |
SCZ84339.1 | accD | NSMM_150077 | NSMM_340029 | Phosphopantetheine attachment site. | acetyl-CoA carboxylase, beta (carboxyltranferase) subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.611 |
SCZ84339.1 | fabD | NSMM_150077 | NSMM_150086 | Phosphopantetheine attachment site. | malonyl-CoA-(acyl-carrier-protein) transacylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.995 |
SCZ84339.1 | fabF | NSMM_150077 | NSMM_150083 | Phosphopantetheine attachment site. | 3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.977 |
SCZ84339.1 | fabH | NSMM_150077 | NSMM_150087 | Phosphopantetheine attachment site. | 3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.554 |
SCZ84339.1 | fabI | NSMM_150077 | NSMM_600054 | Phosphopantetheine attachment site. | Enoyl-(acyl-carrier-protein) reductase, NADH-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.876 |
SCZ84339.1 | fabZ | NSMM_150077 | NSMM_380089 | Phosphopantetheine attachment site. | (3R)-hydroxymyristol acyl carrier protein dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.969 |
SCZ85625.1 | SCZ86933.1 | NSMM_400103 | NSMM_820028 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Urea carboxylase. | 0.859 |
SCZ85625.1 | accD | NSMM_400103 | NSMM_340029 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | acetyl-CoA carboxylase, beta (carboxyltranferase) subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.611 |
SCZ85625.1 | fabD | NSMM_400103 | NSMM_150086 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | malonyl-CoA-(acyl-carrier-protein) transacylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.995 |
SCZ85625.1 | fabF | NSMM_400103 | NSMM_150083 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.977 |
SCZ85625.1 | fabH | NSMM_400103 | NSMM_150087 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.554 |
SCZ85625.1 | fabI | NSMM_400103 | NSMM_600054 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Enoyl-(acyl-carrier-protein) reductase, NADH-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.876 |
SCZ85625.1 | fabZ | NSMM_400103 | NSMM_380089 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | (3R)-hydroxymyristol acyl carrier protein dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.969 |
SCZ86933.1 | SCZ84339.1 | NSMM_820028 | NSMM_150077 | Urea carboxylase. | Phosphopantetheine attachment site. | 0.859 |
SCZ86933.1 | SCZ85625.1 | NSMM_820028 | NSMM_400103 | Urea carboxylase. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.859 |
SCZ86933.1 | accD | NSMM_820028 | NSMM_340029 | Urea carboxylase. | acetyl-CoA carboxylase, beta (carboxyltranferase) subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.999 |
SCZ86933.1 | acpP | NSMM_820028 | NSMM_150084 | Urea carboxylase. | Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.859 |
SCZ86933.1 | fabD | NSMM_820028 | NSMM_150086 | Urea carboxylase. | malonyl-CoA-(acyl-carrier-protein) transacylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.994 |
SCZ86933.1 | fabF | NSMM_820028 | NSMM_150083 | Urea carboxylase. | 3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.983 |
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