STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ85734.1Type II secretion system protein. (395 aa)    
Predicted Functional Partners:
SCZ85735.1
Type II secretion system protein E.
 
 
 0.995
SCZ84932.1
Putative GAF sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.978
gspG
Pseudopilin, cryptic, general secretion pathway; Function of strongly homologous gene; transporter.
 
  
 0.969
SCZ85740.1
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
 
 
 0.934
SCZ85741.1
General secretion pathway transmembrane protein.
 
  
 0.923
SCZ85743.1
Putative transmembrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.909
SCZ85737.1
Putative transmembrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.898
SCZ85736.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.889
tapD
Type 4 prepilin-like proteins leader peptide-processing enzyme (Includes: Leader peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.863
SCZ85738.1
Putative transmembrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.854
Your Current Organism:
Nitrosomonas mobilis
NCBI taxonomy Id: 51642
Other names: N. mobilis, Nitrosococcus mobilis, Nitrosomonas sp. Ms1, strain Nc 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.