STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ85829.1Glycoside hydrolase, family 63. (906 aa)    
Predicted Functional Partners:
glgP
Glycogen phosphorylase.
  
 0.941
SCZ85830.1
Putative Glycogen debranching enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.850
SCZ85828.1
Polyphosphate glucokinase.
 
  
  0.825
pgm-2
Phosphoglucomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.782
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.697
glk
Glucokinase; Belongs to the bacterial glucokinase family.
    
  0.559
NSMM_90072
Alpha amylase catalytic region.
   
 0.539
NSMM_90071
Sucrose-phosphate synthase.
  
 0.525
SCZ85299.1
PfkB domain protein.
    
  0.516
NSMM_90070
PfkB domain protein.
    
  0.516
Your Current Organism:
Nitrosomonas mobilis
NCBI taxonomy Id: 51642
Other names: N. mobilis, Nitrosococcus mobilis, Nitrosomonas sp. Ms1, strain Nc 2
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