Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCZ84434.1 | SCZ86067.1 | NSMM_160024 | NSMM_480069 | Restriction modification system DNA specificity domain protein (fragment). | Nonessential protein. | 0.670 |
SCZ84434.1 | SCZ86081.1 | NSMM_160024 | NSMM_480083 | Restriction modification system DNA specificity domain protein (fragment). | Hypothetical protein; No homology to any previously reported sequences. | 0.639 |
SCZ85770.1 | SCZ86067.1 | NSMM_410005 | NSMM_480069 | Restriction modification system DNA specificity domain (modular protein). | Nonessential protein. | 0.680 |
SCZ85770.1 | SCZ86402.1 | NSMM_410005 | NSMM_540005 | Restriction modification system DNA specificity domain (modular protein). | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.406 |
SCZ86064.1 | SCZ86065.1 | NSMM_480066 | NSMM_480067 | Putative transcriptional regulator with HTH domain (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Hypothetical protein; No homology to any previously reported sequences. | 0.994 |
SCZ86064.1 | SCZ86066.1 | NSMM_480066 | NSMM_480068 | Putative transcriptional regulator with HTH domain (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.448 |
SCZ86064.1 | SCZ86067.1 | NSMM_480066 | NSMM_480069 | Putative transcriptional regulator with HTH domain (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Nonessential protein. | 0.837 |
SCZ86064.1 | SCZ86069.1 | NSMM_480066 | NSMM_480071 | Putative transcriptional regulator with HTH domain (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Plasmid stabilization system (fragment). | 0.460 |
SCZ86065.1 | SCZ86064.1 | NSMM_480067 | NSMM_480066 | Hypothetical protein; No homology to any previously reported sequences. | Putative transcriptional regulator with HTH domain (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.994 |
SCZ86065.1 | SCZ86066.1 | NSMM_480067 | NSMM_480068 | Hypothetical protein; No homology to any previously reported sequences. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.448 |
SCZ86065.1 | SCZ86067.1 | NSMM_480067 | NSMM_480069 | Hypothetical protein; No homology to any previously reported sequences. | Nonessential protein. | 0.837 |
SCZ86066.1 | SCZ86064.1 | NSMM_480068 | NSMM_480066 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative transcriptional regulator with HTH domain (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.448 |
SCZ86066.1 | SCZ86065.1 | NSMM_480068 | NSMM_480067 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Hypothetical protein; No homology to any previously reported sequences. | 0.448 |
SCZ86066.1 | SCZ86067.1 | NSMM_480068 | NSMM_480069 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Nonessential protein. | 0.773 |
SCZ86066.1 | SCZ86068.1 | NSMM_480068 | NSMM_480070 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Type III restriction enzyme, res subunit. | 0.636 |
SCZ86066.1 | SCZ86069.1 | NSMM_480068 | NSMM_480071 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Plasmid stabilization system (fragment). | 0.636 |
SCZ86067.1 | SCZ84434.1 | NSMM_480069 | NSMM_160024 | Nonessential protein. | Restriction modification system DNA specificity domain protein (fragment). | 0.670 |
SCZ86067.1 | SCZ85770.1 | NSMM_480069 | NSMM_410005 | Nonessential protein. | Restriction modification system DNA specificity domain (modular protein). | 0.680 |
SCZ86067.1 | SCZ86064.1 | NSMM_480069 | NSMM_480066 | Nonessential protein. | Putative transcriptional regulator with HTH domain (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.837 |
SCZ86067.1 | SCZ86065.1 | NSMM_480069 | NSMM_480067 | Nonessential protein. | Hypothetical protein; No homology to any previously reported sequences. | 0.837 |
page 1 of 2