Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCZ84849.1 | SCZ84873.1 | NSMM_280019 | NSMM_290012 | Multi-sensor hybrid histidine kinase. | Sensory transduction histidine kinases. | 0.999 |
SCZ84849.1 | SCZ86033.1 | NSMM_280019 | NSMM_480035 | Multi-sensor hybrid histidine kinase. | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | 0.999 |
SCZ84849.1 | SCZ86036.1 | NSMM_280019 | NSMM_480038 | Multi-sensor hybrid histidine kinase. | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) (fragment). | 0.999 |
SCZ84849.1 | SCZ86088.1 | NSMM_280019 | NSMM_480090 | Multi-sensor hybrid histidine kinase. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.796 |
SCZ84849.1 | SCZ86309.1 | NSMM_280019 | NSMM_510027 | Multi-sensor hybrid histidine kinase. | Two-component hybrid sensor and regulator. | 0.999 |
SCZ84849.1 | SCZ86907.1 | NSMM_280019 | NSMM_820002 | Multi-sensor hybrid histidine kinase. | MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor. | 0.999 |
SCZ84849.1 | gacS | NSMM_280019 | NSMM_140024 | Multi-sensor hybrid histidine kinase. | Sensor protein GacS. | 0.999 |
SCZ84849.1 | pheA | NSMM_280019 | NSMM_800061 | Multi-sensor hybrid histidine kinase. | P-protein (Includes: Chorismate mutase; Prephenate dehydratase). | 0.413 |
SCZ84873.1 | SCZ84849.1 | NSMM_290012 | NSMM_280019 | Sensory transduction histidine kinases. | Multi-sensor hybrid histidine kinase. | 0.999 |
SCZ84873.1 | SCZ86033.1 | NSMM_290012 | NSMM_480035 | Sensory transduction histidine kinases. | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | 0.999 |
SCZ84873.1 | SCZ86036.1 | NSMM_290012 | NSMM_480038 | Sensory transduction histidine kinases. | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) (fragment). | 0.999 |
SCZ84873.1 | SCZ86088.1 | NSMM_290012 | NSMM_480090 | Sensory transduction histidine kinases. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.872 |
SCZ84873.1 | SCZ86309.1 | NSMM_290012 | NSMM_510027 | Sensory transduction histidine kinases. | Two-component hybrid sensor and regulator. | 0.999 |
SCZ84873.1 | SCZ86907.1 | NSMM_290012 | NSMM_820002 | Sensory transduction histidine kinases. | MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor. | 0.999 |
SCZ84873.1 | gacS | NSMM_290012 | NSMM_140024 | Sensory transduction histidine kinases. | Sensor protein GacS. | 0.999 |
SCZ84873.1 | pheA | NSMM_290012 | NSMM_800061 | Sensory transduction histidine kinases. | P-protein (Includes: Chorismate mutase; Prephenate dehydratase). | 0.655 |
SCZ86033.1 | SCZ84849.1 | NSMM_480035 | NSMM_280019 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Multi-sensor hybrid histidine kinase. | 0.999 |
SCZ86033.1 | SCZ84873.1 | NSMM_480035 | NSMM_290012 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Sensory transduction histidine kinases. | 0.999 |
SCZ86033.1 | SCZ86036.1 | NSMM_480035 | NSMM_480038 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) (fragment). | 0.999 |
SCZ86033.1 | SCZ86088.1 | NSMM_480035 | NSMM_480090 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.654 |
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