Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCZ86246.1Proline-rich region. (178 aa)    
Predicted Functional Partners:
ptsN
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
  
 
 0.700
SCZ84530.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.656
shc
Squalene--hopene cyclase.
  
     0.619
SCZ86871.1
Hopanoid biosynthesis associated RND transporter like protein HpnN.
  
     0.600
ptsH
Phosphocarrier protein HPr.
    
  0.580
SCZ85321.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.564
SCZ86875.1
MoaA / nifB / pqqE family.
  
     0.557
SCZ85509.1
Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.553
SCZ84853.1
Purine and other phosphorylase, family 1.
  
     0.535
SCZ84318.1
Flagellar protein FliT.
  
     0.530
Your Current Organism:
Nitrosomonas mobilis
NCBI taxonomy Id: 51642
Other names: N. mobilis, Nitrosococcus mobilis, Nitrosomonas sp. Ms1, strain Nc 2
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