STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ86548.1Haloacid dehalogenase/epoxide hydrolase family. (218 aa)    
Predicted Functional Partners:
SCZ86549.1
NAD-dependent epimerase/dehydratase.
 
    0.953
serA
D-isomer specific 2-hydroxyacid dehydrogenase.
 
  
 0.917
SCZ86551.1
2-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
     0.897
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase.
 
     0.862
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
    0.845
SCZ86555.1
O-antigen polymerase.
 
     0.812
SCZ86546.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.742
SCZ85805.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.725
cycA
Cytochrome c-554.
  
  
  0.687
cycA-3
Cytochrome c-554.
  
  
  0.687
Your Current Organism:
Nitrosomonas mobilis
NCBI taxonomy Id: 51642
Other names: N. mobilis, Nitrosococcus mobilis, Nitrosomonas sp. Ms1, strain Nc 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.