Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ADU72_0371 | ADU72_0372 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | Amino acid permease. | 0.545 |
ADU72_0372 | ADU72_0371 | Amino acid permease. | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | 0.545 |
ADU72_0372 | ADU72_1249 | Amino acid permease. | Trehalose-6-phosphate hydrolase. | 0.402 |
ADU72_0372 | ADU72_1426 | Amino acid permease. | Oligo-1,6-glucosidase. | 0.402 |
ADU72_0372 | ADU72_1427 | Amino acid permease. | Alpha-amylase. | 0.402 |
ADU72_0372 | ADU72_1435 | Amino acid permease. | Oligo-1,6-glucosidase. | 0.402 |
ADU72_0372 | ADU72_1441 | Amino acid permease. | Oligo-1,6-glucosidase. | 0.402 |
ADU72_0372 | ADU72_2030 | Amino acid permease. | Family 13 glycosyl hydrolase. | 0.402 |
ADU72_1249 | ADU72_0372 | Trehalose-6-phosphate hydrolase. | Amino acid permease. | 0.402 |
ADU72_1426 | ADU72_0372 | Oligo-1,6-glucosidase. | Amino acid permease. | 0.402 |
ADU72_1426 | ADU72_1427 | Oligo-1,6-glucosidase. | Alpha-amylase. | 0.871 |
ADU72_1426 | ADU72_1441 | Oligo-1,6-glucosidase. | Oligo-1,6-glucosidase. | 0.916 |
ADU72_1427 | ADU72_0372 | Alpha-amylase. | Amino acid permease. | 0.402 |
ADU72_1427 | ADU72_1426 | Alpha-amylase. | Oligo-1,6-glucosidase. | 0.871 |
ADU72_1427 | ADU72_1435 | Alpha-amylase. | Oligo-1,6-glucosidase. | 0.408 |
ADU72_1435 | ADU72_0372 | Oligo-1,6-glucosidase. | Amino acid permease. | 0.402 |
ADU72_1435 | ADU72_1427 | Oligo-1,6-glucosidase. | Alpha-amylase. | 0.408 |
ADU72_1441 | ADU72_0372 | Oligo-1,6-glucosidase. | Amino acid permease. | 0.402 |
ADU72_1441 | ADU72_1426 | Oligo-1,6-glucosidase. | Oligo-1,6-glucosidase. | 0.916 |
ADU72_2030 | ADU72_0372 | Family 13 glycosyl hydrolase. | Amino acid permease. | 0.402 |