STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU72_0643Lipoteichoic acid synthase LtaS Type IIb. (719 aa)    
Predicted Functional Partners:
ADU72_1864
Lipoteichoic acid synthase LtaS Type IIa.
  
 
 
0.909
ADU72_0355
Adenine-specific methyltransferase.
  
     0.643
ADU72_2146
TPR-repeat-containing protein, putative component of Menaquinone-cytochrome C reductase.
 
    0.607
ADU72_0641
Hypothetical protein.
 
     0.605
ADU72_2135
Hypothetical protein; Belongs to the UPF0346 family.
  
     0.579
ADU72_0376
Transcription regulator.
 
   
 0.572
ADU72_0642
Acetyltransferase, GNAT family.
       0.531
ADU72_0340
Competence protein CoiA.
  
     0.511
ADU72_0640
Integral membrane protein.
 
     0.504
ADU72_2091
Hypothetical protein; Belongs to the UPF0398 family.
  
     0.490
Your Current Organism:
Pediococcus damnosus
NCBI taxonomy Id: 51663
Other names: ATCC 29358, CCUG 32251, CIP 102264, DSM 20331, JCM 5886, LMG 11484, LMG:11484, NCIMB 12010, P. damnosus, strain Be.1
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