STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU72_0905Phage lysin, glycosyl hydrolase, family 25. (459 aa)    
Predicted Functional Partners:
ADU72_0904
Lipoprotein precursor (putative).
 
    0.939
ADU72_1398
Extracellular protein.
  
     0.765
ADU72_1386
Extracellular protein.
  
     0.757
ADU72_0907
D-alanyl-D-alanine carboxypeptidase.
 
     0.726
ADU72_0970
D-alanyl-D-alanine carboxypeptidase.
  
     0.717
ADU72_0773
Hypothetical protein.
  
     0.690
ADU72_0458
Hypothetical protein.
  
     0.686
ADU72_2165
Integral membrane protein.
  
     0.685
ADU72_0446
Bifunctional autolysin Atl; N-acetylmuramoyl-L-alanine amidase; endo-beta-N-acetylglucosaminidase.
   
 0.679
ADU72_1177
Hypothetical protein.
  
     0.674
Your Current Organism:
Pediococcus damnosus
NCBI taxonomy Id: 51663
Other names: ATCC 29358, CCUG 32251, CIP 102264, DSM 20331, JCM 5886, LMG 11484, LMG:11484, NCIMB 12010, P. damnosus, strain Be.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.