STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU72_0959Transcriptional regulator, TetR family. (185 aa)    
Predicted Functional Partners:
ADU72_0961
Abhydrolase, alpha/beta hydrolase fold.
 
    0.850
ADU72_0283
Adhesion exoprotein.
  
     0.758
ADU72_1454
Trans-acting positive regulator.
  
   0.735
ADU72_0960
2-amino-3-carboxymuconate 6-semialdehyde decarboxylase.
 
     0.713
ADU72_1114
Hypothetical protein.
  
     0.680
ADU72_0525
Alpha/beta hydrolase fold.
 
    0.662
ADU72_0282
Hypothetical protein.
  
     0.633
ADU72_0222
Hypothetical protein.
 
     0.604
ADU72_1469
Glycosyl transferase, group 2 family protein.
  
   
 0.563
ADU72_0518
Transcriptional regulator, MarR family.
  
     0.538
Your Current Organism:
Pediococcus damnosus
NCBI taxonomy Id: 51663
Other names: ATCC 29358, CCUG 32251, CIP 102264, DSM 20331, JCM 5886, LMG 11484, LMG:11484, NCIMB 12010, P. damnosus, strain Be.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.