STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU72_0987Sensor histidine kinase. (384 aa)    
Predicted Functional Partners:
ADU72_0988
DNA-binding response regulator, OmpR family.
 
 0.976
ADU72_1944
DNA-binding heavy metal response regulator.
 
 0.841
ADU72_1688
DNA-binding response regulator, OmpR family.
 
 0.823
ADU72_1613
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
 
 0.814
ADU72_1138
Two-component response regulator SA14-24.
 
 0.810
ADU72_0940
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 0.743
ADU72_1045
Two-component system regulator.
 
 0.688
ADU72_0986
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.661
ADU72_0985
Phosphinothricin N-acetyltransferase.
       0.485
ADU72_1136
YycH protein.
 
  
 0.482
Your Current Organism:
Pediococcus damnosus
NCBI taxonomy Id: 51663
Other names: ATCC 29358, CCUG 32251, CIP 102264, DSM 20331, JCM 5886, LMG 11484, LMG:11484, NCIMB 12010, P. damnosus, strain Be.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.