STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU72_1010Internalin-like protein (LPXTG motif). (1822 aa)    
Predicted Functional Partners:
ADU72_2066
Flavocytochrome C sulfide dehydrogenase.
  
     0.725
ADU72_1011
Hypothetical protein.
       0.572
ADU72_0953
Hypothetical protein.
  
     0.563
ADU72_0737
Hypothetical protein.
  
     0.562
ADU72_0744
Hypothetical protein.
  
     0.558
ADU72_0762
Hypothetical protein.
  
     0.536
ADU72_0480
Putative acyltransferase.
  
     0.532
ADU72_0758
Beta-lactamase class A.
  
     0.503
ADU72_0975
Flavocytochrome C sulfide dehydrogenase.
  
     0.485
ADU72_1047
ABC transporter, permease protein.
  
     0.443
Your Current Organism:
Pediococcus damnosus
NCBI taxonomy Id: 51663
Other names: ATCC 29358, CCUG 32251, CIP 102264, DSM 20331, JCM 5886, LMG 11484, LMG:11484, NCIMB 12010, P. damnosus, strain Be.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.