STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU72_1424Maltose operon transcriptional repressor MalR, LacI family. (334 aa)    
Predicted Functional Partners:
ADU72_0580
Galactose operon repressor, GalR-LacI family.
  
     0.709
ADU72_1867
Phosphocarrier protein of PTS system.
   
 
 0.634
ackA-3
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 
 0.566
ADU72_2161
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.544
ADU72_2029
Sucrose-6-phosphate hydrolase (EC 3.2.1.B3); Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.539
ADU72_1427
Alpha-amylase.
 
  
 0.494
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
   0.465
ADU72_1436
Multiple sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.447
ADU72_0823
Transcriptional regulator, GntR family.
  
  
 0.443
ADU72_1437
Trehalose phosphorylase.
 
  
 0.443
Your Current Organism:
Pediococcus damnosus
NCBI taxonomy Id: 51663
Other names: ATCC 29358, CCUG 32251, CIP 102264, DSM 20331, JCM 5886, LMG 11484, LMG:11484, NCIMB 12010, P. damnosus, strain Be.1
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