STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU72_2136YfaA. (201 aa)    
Predicted Functional Partners:
ADU72_2137
Lipase/Acylhydrolase with GDSL-like motif.
 
  
 0.977
ADU72_2135
Hypothetical protein; Belongs to the UPF0346 family.
 
   
 0.940
ADU72_2134
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
     
 0.846
ADU72_2138
Hypothetical protein.
  
  
 0.683
ADU72_2086
Hypothetical protein.
  
    0.601
ADU72_1914
ABC transporter, permease protein EscB.
  
     0.588
ADU72_2146
TPR-repeat-containing protein, putative component of Menaquinone-cytochrome C reductase.
 
     0.543
ADU72_2153
Hypothetical protein.
  
     0.540
ADU72_0355
Adenine-specific methyltransferase.
  
     0.538
ADU72_0834
Universal stress protein family.
  
     0.526
Your Current Organism:
Pediococcus damnosus
NCBI taxonomy Id: 51663
Other names: ATCC 29358, CCUG 32251, CIP 102264, DSM 20331, JCM 5886, LMG 11484, LMG:11484, NCIMB 12010, P. damnosus, strain Be.1
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