STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU72_2188N-acetylmuramoyl-L-alanine amidase. (288 aa)    
Predicted Functional Partners:
ADU72_2134
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
 
  
 0.817
ADU72_1959
GlpG protein (membrane protein of glp regulon).
  
   0.694
ADU72_0291
Extracellular protein, gamma-D-glutamate-meso-diaminopimelate muropeptidase.
 
  
 0.690
ADU72_1832
Invasion associated protein p60.
  
  
 0.676
ADU72_1141
Extracellular protein, gamma-D-glutamate-meso-diaminopimelate muropeptidase.
  
  
 0.649
ADU72_2007
Serine/threonine protein kinase PrkC, regulator of stationary phase.
  
  
 0.613
hisS
Histidyl-tRNA synthetase.
  
    0.570
aspS
Aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
  
    0.561
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
  
  
 0.550
ADU72_1957
Cell division protein FtsI.
 
  
 0.542
Your Current Organism:
Pediococcus damnosus
NCBI taxonomy Id: 51663
Other names: ATCC 29358, CCUG 32251, CIP 102264, DSM 20331, JCM 5886, LMG 11484, LMG:11484, NCIMB 12010, P. damnosus, strain Be.1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.