STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV25673.1Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (106 aa)    
Predicted Functional Partners:
SFV29267.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.550
SFV25672.1
Hypothetical protein.
       0.540
SFV26314.1
Protocatechuate 3,4-dioxygenase beta subunit.
  
 
 0.501
SFV27578.1
Ferredoxin-NADP reductase.
  
  
 0.481
SFV38176.1
Hypothetical protein.
    
 0.450
SFV28037.1
3-hydroxyisobutyrate dehydrogenase.
  
 
  0.429
SFV32366.1
3-hydroxyisobutyrate dehydrogenase.
  
 
  0.429
SFV39129.1
3-hydroxyisobutyrate dehydrogenase.
  
 
  0.429
SFV32825.1
DNA-binding transcriptional regulator, MerR family.
    
 0.408
SFV34196.1
Acetyltransferase.
    
  0.406
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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