STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV25716.1TIGR02302 family protein. (896 aa)    
Predicted Functional Partners:
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.850
SFV28045.1
N-terminal double-transmembrane domain-containing protein.
  
    0.775
SFV28041.1
Hypothetical protein.
  
     0.774
SFV28049.1
Protein of unknown function DUF58.
  
     0.772
SFV28284.1
Protein of unknown function.
  
     0.744
SFV36860.1
Putative signal transducing protein.
 
     0.739
SFV38097.1
HemY protein.
  
    0.727
SFV32984.1
Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex.
  
    0.683
SFV32649.1
Signal transduction histidine kinase.
    
 0.680
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.672
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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