STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV25989.1Lipopolysaccharide transport protein LptA/LPS export ABC transporter protein LptC,TIGR04409. (648 aa)    
Predicted Functional Partners:
SFV25986.1
Lipopolysaccharide export system ATP-binding protein.
  
 
 0.995
lptD
LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
 
 0.963
SFV37253.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.857
SFV33017.1
Hypothetical protein.
  
     0.750
SFV38568.1
Hypothetical protein.
  
     0.741
SFV38095.1
Hypothetical protein.
  
     0.732
SFV38514.1
Invasion protein IalB, involved in pathogenesis.
  
     0.731
SFV29142.1
Paraquat-inducible protein A.
  
     0.727
SFV37756.1
Hypothetical protein.
 
     0.721
SFV25726.1
Membrane carboxypeptidase (penicillin-binding protein).
  
     0.713
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
Server load: low (24%) [HD]