STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV26182.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
SFV26184.1
Hypothetical protein.
 
     0.947
SFV26179.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.839
SFV26186.1
Sulfide:quinone oxidoreductase.
 
     0.809
SFV38147.1
Hypothetical protein.
 
     0.791
SFV26188.1
Hypothetical protein.
       0.726
SFV26173.1
DNA-binding transcriptional regulator, ArsR family.
 
     0.648
SFV26177.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
     
 0.575
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
   
    0.469
SFV26190.1
Hypothetical protein.
       0.421
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.