STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV26369.1Flp pilus assembly protein TadG. (208 aa)    
Predicted Functional Partners:
SFV26371.1
TadE-like protein.
 
     0.960
SFV26388.1
Pilus assembly protein CpaE.
 
  
 0.919
SFV26373.1
Pilus formation protein N terminal region.
 
  
 0.902
SFV26381.1
Pilus assembly protein CpaB.
 
  
 0.887
SFV26393.1
Tight adherence protein B.
 
  
 0.883
SFV26396.1
Tight adherence protein C.
 
    0.848
SFV26379.1
Prepilin peptidase CpaA.
 
  
 0.823
SFV26376.1
Pilus assembly protein Flp/PilA.
 
  
 0.803
SFV26276.1
Putative Flp pilus-assembly TadE/G-like.
 
   
 0.799
SFV26398.1
Flp pilus assembly protein TadD, contains TPR repeats.
 
  
 0.786
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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