STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV26570.1precorrin-6Y C5,15-methyltransferase (decarboxylating). (407 aa)    
Predicted Functional Partners:
SFV26557.1
precorrin-8X methylmutase.
 
 
 0.999
SFV26577.1
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 0.999
SFV26566.1
precorrin-6A/cobalt-precorrin-6A reductase.
 
 
 0.997
SFV26563.1
Precorrin-3 methyltransferase.
 
 
 0.988
SFV26560.1
Precorrin-2/cobalt-factor-2 C20-methyltransferase.
 
 
 0.978
cobB
Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
  
 0.971
SFV37111.1
precorrin-6A synthase (deacetylating); Catalyzes the methylation of C-1 in precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A.
 
 
 0.968
SFV26550.1
Cobaltochelatase CobN subunit.
 
  
 0.960
SFV26554.1
precorrin-3B synthase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.925
SFV26532.1
cob(II)yrinic acid a,c-diamide reductase.
  
 
 0.865
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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