STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV26590.1DNA-directed RNA polymerase specialized sigma subunit, sigma24 family. (268 aa)    
Predicted Functional Partners:
SFV32649.1
Signal transduction histidine kinase.
  
 0.992
SFV38921.1
His Kinase A (phospho-acceptor) domain-containing protein.
  
 0.963
SFV28443.1
Response regulator receiver domain-containing protein.
  
 0.956
SFV30069.1
PAS domain S-box-containing protein.
  
 0.944
SFV37263.1
Flagellar motor switch protein FliM.
  
 
 0.924
SFV25804.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
  
 0.921
SFV26604.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
 0.914
SFV29087.1
Cell cycle control histidine kinase CckA.
  
 0.910
SFV35050.1
PAS domain S-box-containing protein.
  
 0.910
SFV38049.1
Signal transduction histidine kinase.
  
 0.910
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.